GAMBARDELLA, GENNARO
GAMBARDELLA, GENNARO
Genomic and experimental medicine
A reverse-engineering approach to dissect post-translational modulators of transcription factor's activity from transcriptional data
2015-01-01 Gambardella, Gennaro; Peluso, Ivana; Montefusco, Sandro; Bansal, Mukesh; Medina, Diego L; Lawrence, Neil; Di Bernardo, Diego; Medina Sanabria, Diego Luis
A single-cell analysis of breast cancer cell lines to study tumour heterogeneity and drug response
2022-01-01 Gambardella, G.; Viscido, G.; Tumaini, B.; Isacchi, A.; Bosotti, R.; Di Bernardo, D.
A tool for visualization and analysis of single-cell RNA-seq data based on text mining
2019-01-01 Gambardella, G.; Di Bernardo, D.
Cancer of Unknown Primary (CUP): genetic evidence for a novel nosological entity? A case report
2020-01-01 Benvenuti, S.; Milan, M.; Geuna, E.; Pisacane, A.; Senetta, R.; Gambardella, G.; Stella, G. M.; Montemurro, F.; Sapino, A.; Boccaccio, C.; Comoglio, P. M.
Cancer of unknown primary stem-like cells model multi-organ metastasis and unveil liability to MEK inhibition
2021-01-01 Verginelli, F.; Pisacane, A.; Gambardella, G.; D'Ambrosio, A.; Candiello, E.; Ferrio, M.; Panero, M.; Casorzo, L.; Benvenuti, S.; Cascardi, E.; Senetta, R.; Geuna, E.; Ballabio, A.; Montemurro, F.; Sapino, A.; Comoglio, P. M.; Boccaccio, C.
Differential network analysis for the identification of condition-specific pathway activity and regulation
2013-01-01 Gambardella, G; Moretti, Mn; De Cegli, R; Cardone, L; Peron, Adriano; Di Bernardo, Diego
Fibroblast growth factor signalling controls nervous system patterning and pigment cell formation in Ciona intestinalis
2014-01-01 Racioppi, C; Kamal, A; Razy Krajka, F; Gambardella, G; Zanetti, L; Di Bernardo, Diego; Sanges, R; Christiaen, L; Ristoratore, F.
GADD34 is a modulator of autophagy during starvation
2020-01-01 Gambardella, Gennaro; Staiano, Leopoldo; Moretti, Maria Nicoletta; De Cegli, Rossella; Fagnocchi, Luca; Di Tullio, Giuseppe; Polletti, Sara; Braccia, Clarissa; Armirotti, Andrea; Zippo, Alessio; Ballabio, Andrea; De Matteis, Maria Antonietta; Di Bernardo, Diego
Joint processing of long- and short-read sequencing data with deep learning improves variant calling
2025-01-01 Gambardella, Gennaro
MEGA-V: Detection of variant gene sets in patient cohorts
2017-01-01 Gambardella, G.; Cereda, M.; Benedetti, L.; Ciccarelli, F. D.
MicroRNA 483‐3p overexpression unleashes invasive growth of metastatic colorectal cancer via NDRG1 downregulation and ensuing activation of the ERBB3 / AKT axis
2023-01-01 Candiello, Ermes; Reato, Gigliola; Verginelli, Federica; Gambardella, Gennaro; D′Ambrosio, Antonio; Calandra, Noemi; Orzan, Francesca; Iuliano, Antonella; Albano, Raffaella; Sassi, Francesco; Luraghi, Paolo; Comoglio, Paolo M.; Bertotti, Andrea; Trusolino, Livio; Boccaccio, Carla
Mutated axon guidance gene PLXNB2 sustains growth and invasiveness of stem cells isolated from cancers of unknown primary
2023-01-01 Brundu, Serena; Napolitano, Virginia; Franzolin, Giulia; Lo Cascio, Ettore; Mastrantonio, Roberta; Sardo, Gabriele; Cascardi, Eliano; Verginelli, Federica; Sarnataro, Sergio; Gambardella, Gennaro; Pisacane, Alberto; Arcovito, Alessandro; Boccaccio, Carla; M Comoglio, Paolo; Giraudo, Enrico; Tamagnone, Luca
O-linked mucin-type glycosylation regulates the transcriptional programme downstream of {EGFR}
2020-01-01 Tajadura-Ortega, Virginia; Gambardella, Gennaro; Skinner, Alexandra; Halim, Adnan; Van Coillie, Julie; Ter-Borch Gram Schjoldager, Katrine; Beatson, Richard; Graham, Rosalind; Achkova, Daniela; Taylor-Papadimitriou, Joyce; D Ciccarelli, Francesca; M Burchell, Joy
Patients with genetically heterogeneous synchronous colorectal cancer carry rare damaging germline mutations in immune-related genes
2016-01-01 Cereda, M.; Gambardella, G.; Benedetti, L.; Iannelli, F.; Patel, D.; Basso, G.; Guerra, R. F.; Mourikis, T. P.; Puccio, I.; Sinha, S.; Laghi, L.; Spencer, J.; Rodriguez-Justo, M.; Ciccarelli, F. D.
Predicting drug response from single-cell expression profiles of tumours
2023-01-01 Pellecchia, Simona; Viscido, Gaetano; Franchini, Melania; Gambardella, Gennaro
Reverse engineering a mouse embryonic stem cell-specific transcriptional network reveals a new modulator of neuronal differentiation
2013-01-01 De Cegli, R.; Iacobacci, S.; Flore, G.; Gambardella, G.; Mao, L.; Cutillo, L.; Lauria, M.; Klose, J.; Illingworth, E.; Banfi, S.; Diego, Di Bernardo
Single cell lineage tracing reveals clonal dynamics of anti-EGFR therapy resistance in triple negative breast cancer
2024-01-01 Pellecchia, Simona; Franchini, Melania; Viscido, Gaetano; Arnese, Riccardo; Gambardella, Gennaro
Single-cell gene set enrichment analysis and transfer learning for functional annotation of scRNA-seq data
2023-01-01 Franchini, Melania; Pellecchia, Simona; Viscido, Gaetano; Gambardella, Gennaro
Single-Cell RNA Sequencing Analysis: A Step-by-Step Overview
2021-01-01 Slovin, S.; Carissimo, A.; Panariello, F.; Grimaldi, A.; Bouche, V.; Gambardella, G.; Cacchiarelli, D.
TFEBexplorer: An integrated tool to study genes regulated by the stress-responsive Transcription Factor EB
2022-01-01 De Cegli, Rossella; Carrella, Diego; Siciliano, Diletta; Gambardella, Gennaro; Napolitano, Gennaro; Di Malta, Chiara; Ballabio, Andrea; Di Bernardo, Diego
| Titolo | Data di pubblicazione | Autore(i) | File |
|---|---|---|---|
| A reverse-engineering approach to dissect post-translational modulators of transcription factor's activity from transcriptional data | 1-gen-2015 | Gambardella, Gennaro; Peluso, Ivana; Montefusco, Sandro; Bansal, Mukesh; Medina, Diego L; Lawrence, Neil; Di Bernardo, Diego; Medina Sanabria, Diego Luis | |
| A single-cell analysis of breast cancer cell lines to study tumour heterogeneity and drug response | 1-gen-2022 | Gambardella, G.; Viscido, G.; Tumaini, B.; Isacchi, A.; Bosotti, R.; Di Bernardo, D. | |
| A tool for visualization and analysis of single-cell RNA-seq data based on text mining | 1-gen-2019 | Gambardella, G.; Di Bernardo, D. | |
| Cancer of Unknown Primary (CUP): genetic evidence for a novel nosological entity? A case report | 1-gen-2020 | Benvenuti, S.; Milan, M.; Geuna, E.; Pisacane, A.; Senetta, R.; Gambardella, G.; Stella, G. M.; Montemurro, F.; Sapino, A.; Boccaccio, C.; Comoglio, P. M. | |
| Cancer of unknown primary stem-like cells model multi-organ metastasis and unveil liability to MEK inhibition | 1-gen-2021 | Verginelli, F.; Pisacane, A.; Gambardella, G.; D'Ambrosio, A.; Candiello, E.; Ferrio, M.; Panero, M.; Casorzo, L.; Benvenuti, S.; Cascardi, E.; Senetta, R.; Geuna, E.; Ballabio, A.; Montemurro, F.; Sapino, A.; Comoglio, P. M.; Boccaccio, C. | |
| Differential network analysis for the identification of condition-specific pathway activity and regulation | 1-gen-2013 | Gambardella, G; Moretti, Mn; De Cegli, R; Cardone, L; Peron, Adriano; Di Bernardo, Diego | |
| Fibroblast growth factor signalling controls nervous system patterning and pigment cell formation in Ciona intestinalis | 1-gen-2014 | Racioppi, C; Kamal, A; Razy Krajka, F; Gambardella, G; Zanetti, L; Di Bernardo, Diego; Sanges, R; Christiaen, L; Ristoratore, F. | |
| GADD34 is a modulator of autophagy during starvation | 1-gen-2020 | Gambardella, Gennaro; Staiano, Leopoldo; Moretti, Maria Nicoletta; De Cegli, Rossella; Fagnocchi, Luca; Di Tullio, Giuseppe; Polletti, Sara; Braccia, Clarissa; Armirotti, Andrea; Zippo, Alessio; Ballabio, Andrea; De Matteis, Maria Antonietta; Di Bernardo, Diego | |
| Joint processing of long- and short-read sequencing data with deep learning improves variant calling | 1-gen-2025 | Gambardella, Gennaro | |
| MEGA-V: Detection of variant gene sets in patient cohorts | 1-gen-2017 | Gambardella, G.; Cereda, M.; Benedetti, L.; Ciccarelli, F. D. | |
| MicroRNA 483‐3p overexpression unleashes invasive growth of metastatic colorectal cancer via NDRG1 downregulation and ensuing activation of the ERBB3 / AKT axis | 1-gen-2023 | Candiello, Ermes; Reato, Gigliola; Verginelli, Federica; Gambardella, Gennaro; D′Ambrosio, Antonio; Calandra, Noemi; Orzan, Francesca; Iuliano, Antonella; Albano, Raffaella; Sassi, Francesco; Luraghi, Paolo; Comoglio, Paolo M.; Bertotti, Andrea; Trusolino, Livio; Boccaccio, Carla | |
| Mutated axon guidance gene PLXNB2 sustains growth and invasiveness of stem cells isolated from cancers of unknown primary | 1-gen-2023 | Brundu, Serena; Napolitano, Virginia; Franzolin, Giulia; Lo Cascio, Ettore; Mastrantonio, Roberta; Sardo, Gabriele; Cascardi, Eliano; Verginelli, Federica; Sarnataro, Sergio; Gambardella, Gennaro; Pisacane, Alberto; Arcovito, Alessandro; Boccaccio, Carla; M Comoglio, Paolo; Giraudo, Enrico; Tamagnone, Luca | |
| O-linked mucin-type glycosylation regulates the transcriptional programme downstream of {EGFR} | 1-gen-2020 | Tajadura-Ortega, Virginia; Gambardella, Gennaro; Skinner, Alexandra; Halim, Adnan; Van Coillie, Julie; Ter-Borch Gram Schjoldager, Katrine; Beatson, Richard; Graham, Rosalind; Achkova, Daniela; Taylor-Papadimitriou, Joyce; D Ciccarelli, Francesca; M Burchell, Joy | |
| Patients with genetically heterogeneous synchronous colorectal cancer carry rare damaging germline mutations in immune-related genes | 1-gen-2016 | Cereda, M.; Gambardella, G.; Benedetti, L.; Iannelli, F.; Patel, D.; Basso, G.; Guerra, R. F.; Mourikis, T. P.; Puccio, I.; Sinha, S.; Laghi, L.; Spencer, J.; Rodriguez-Justo, M.; Ciccarelli, F. D. | |
| Predicting drug response from single-cell expression profiles of tumours | 1-gen-2023 | Pellecchia, Simona; Viscido, Gaetano; Franchini, Melania; Gambardella, Gennaro | |
| Reverse engineering a mouse embryonic stem cell-specific transcriptional network reveals a new modulator of neuronal differentiation | 1-gen-2013 | De Cegli, R.; Iacobacci, S.; Flore, G.; Gambardella, G.; Mao, L.; Cutillo, L.; Lauria, M.; Klose, J.; Illingworth, E.; Banfi, S.; Diego, Di Bernardo | |
| Single cell lineage tracing reveals clonal dynamics of anti-EGFR therapy resistance in triple negative breast cancer | 1-gen-2024 | Pellecchia, Simona; Franchini, Melania; Viscido, Gaetano; Arnese, Riccardo; Gambardella, Gennaro | |
| Single-cell gene set enrichment analysis and transfer learning for functional annotation of scRNA-seq data | 1-gen-2023 | Franchini, Melania; Pellecchia, Simona; Viscido, Gaetano; Gambardella, Gennaro | |
| Single-Cell RNA Sequencing Analysis: A Step-by-Step Overview | 1-gen-2021 | Slovin, S.; Carissimo, A.; Panariello, F.; Grimaldi, A.; Bouche, V.; Gambardella, G.; Cacchiarelli, D. | |
| TFEBexplorer: An integrated tool to study genes regulated by the stress-responsive Transcription Factor EB | 1-gen-2022 | De Cegli, Rossella; Carrella, Diego; Siciliano, Diletta; Gambardella, Gennaro; Napolitano, Gennaro; Di Malta, Chiara; Ballabio, Andrea; Di Bernardo, Diego |